CAM atmosphere model initialization Read in cam_inparm namelist from: atm_in Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 1 will have averaging flag A Unless overridden by namelist input on a per-field basis (FINCL), All fields on history file 2 will have averaging flag I SPMD SWAP_COMM OPTIONS: swap_comm_protocol = 4 swap_comm_maxreq = 128 SPMD FLOW CONTROL GATHER OPTION: fc_gather_flow_cntl = 64 cld_sediment_readnl: cldsed_ice_stokes_fac = 1.00000000000000 rad_cnst_readnl: Radiation constituent lists: list_init1: namelist input for climate list rad namelist spec: A:Q:H2O rad namelist spec: N:O2:O2 rad namelist spec: N:CO2:CO2 rad namelist spec: N:ozone:O3 rad namelist spec: N:N2O:N2O rad namelist spec: N:CH4:CH4 rad namelist spec: N:CFC11:CFC11 rad namelist spec: N:CFC12:CFC12 gas list for climate calculations A:H2O has constituents name:Q N:O3 has pbuf name:ozone N:O2 has pbuf name:O2 N:CO2 has pbuf name:CO2 N:N2O has pbuf name:N2O N:CH4 has pbuf name:CH4 N:CFC11 has pbuf name:CFC11 N:CFC12 has pbuf name:CFC12 bulk aerosol list for climate calculations modal aerosol list for climate calculations Mode Definitions solar_data_readnl: solar_const (W/m2) = -9999.00000000000 solar_data_readnl: solar_data_file = /work/shared/noresm/inputdata/atm/cam/solar/solar_ave_sc19-sc23.c090810.nc solar_data_readnl: solar_data_type = SERIAL solar_data_readnl: solar_data_ymd = 0 solar_data_readnl: solar_data_tod = 0 Reading aerosol tables from : /work/shared/noresm/inputdata/noresm-only/atm/cam /camoslo/AeroTab_27jan16 Reading ocean tracers from : /work/shared/noresm/inputdata/noresm-only/atm/cam/ camoslo/Lana_ocean_1849_2006.nc DMS emission source is : lana Ocean POM emission source is : odowd ------------------------------------------ *** INPUT VARIABLES (CAM_INPARM) *** ------------------------------------------ Continuation of an earlier run ********** CASE = PD6h_MG15MegVadSOA ********** UNSET Initial dataset is: /work/shared/noresm/inputdata/atm/cam/inic/fv/cami-mam3_0000-01-01_0.9x1.25_L30 _c100618.nc Topography dataset is: /work/shared/noresm/inputdata/atm/cam/topo/USGS-gtopo30_0.9x1.25_remap_c051027. nc Time-invariant (absorption/emissivity) factor dataset is: absems_data Run type flag (NSREST) 0=initial, 1=restart, 3=branch 3 Summary of restart module options: Restart pointer file is: ./rpointer.atm Branch run will start from: /work/kirkevag/noresm/PD6h_MG15MegVadSOA/run/PD_MG15MegVadSOA.cam.r.0013-02-01- 00000.nc Initial conditions history files will be written yearly. Lowest level for dry adiabatic adjust (NLVDRY) 3 Frequency of Shortwave Radiation calc. (IRADSW) 2 Frequency of Longwave Radiation calc. (IRADLW) 2 Advected constituent list: 1 Q Specific humidity wet 2 CLDLIQ Grid box averaged cloud liquid amount wet 3 CLDICE Grid box averaged cloud ice amount wet 4 NUMLIQ Grid box averaged cloud liquid number wet 5 NUMICE Grid box averaged cloud ice number wet 6 SO2 SO2 dry 7 H2SO4 H2SO4 dry 8 DMS DMS dry 9 H2O2 H2O2 dry 10 SO4_NA SO4_NA dry 11 SO4_A1 SO4_A1 dry 12 SO4_A2 SO4_A2 dry 13 SO4_AC SO4_AC dry 14 SO4_PR SO4_PR dry 15 BC_N BC_N dry 16 BC_AX BC_AX dry 17 BC_NI BC_NI dry 18 BC_A BC_A dry 19 BC_AI BC_AI dry 20 BC_AC BC_AC dry 21 OM_NI OM_NI dry 22 OM_AI OM_AI dry 23 OM_AC OM_AC dry 24 DST_A2 DST_A2 dry 25 DST_A3 DST_A3 dry 26 SS_A1 SS_A1 dry 27 SS_A2 SS_A2 dry 28 SS_A3 SS_A3 dry 29 SOA_NA SOA_NA dry 30 SOA_A1 SOA_A1 dry 31 SOA_LV SOA_LV dry 32 SOA_SV SOA_SV dry 33 monoterp monoterp dry 34 isoprene isoprene dry (GETFIL): attempting to find local file PD_MG15MegVadSOA.cam.r.0013-02-01-00000.nc (GETFIL): using PD_MG15MegVadSOA.cam.r.0013-02-01-00000.nc in current working directory Opened existing file PD_MG15MegVadSOA.cam.r.0013-02-01-00000.nc 0 Files for restart: initialize_clock: stop date must be specified later than current date: Current date (yr, mon, day, tod): 13 2 1 0 Stop date (yr, mon, day, tod): 13 2 1 0 (shr_sys_abort) WARNING: calling shr_mpi_abort() and stopping